Protein Sequence Classification Using Feature Selection

The sheer volume of data today and its expected growth over the next years are some of the key challenges in data mining and knowledge discovery applications. Besides the huge number of data samples that are collected and processed, the high dimensional nature of data arising in many applications causes the need to develop effective and efficient techniques that are able to deal with this massive amount of data. In addition to the significant increase in the demand of computational resources, those large datasets might also influence the quality of several data mining applications (especially if the number of features is very high compared to the number of samples). As the dimensionality of data increases, many types of data analysis and classification problems become significantly harder. This can lead to problems for both supervised and unsupervised learning. Dimensionality reduction and feature (subset) selection methods are two types of techniques for reducing the attribute space. While in feature selection a subset of the original attributes is extracted, dimensionality reduction in general produces linear combinations of the original attribute set.